BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002G12LP1|AL425025
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1141 1437 0.0
>3x_Contig1141
Length = 5795
Score = 1437 bits (710), Expect = 0.0
Identities = 745/770 (96%), Gaps = 1/770 (0%)
Strand = Plus / Minus
Query: 1 atmctcaaaccgtgatcctgcattaacgtataaacccagagctgaaaagtgtccaggaac 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atcctcaaaccgtgatcctgcattaacgtataaacccagagctgaaaagtgtccaggaac 710
Query: 61 atttgaagtagcaactttcacaccgttatccaaagtagtgacctgtgaattctcagcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 atttgaagtagcaactttcacaccgttatccaaagtagtgacctgtgaattctcagcatt 650
Query: 121 tttactaatttgcgagtaccatttccctctggctaatctaccaacggtggagtttcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tttactaatttgcgagtaccatttccctctggctaatctaccaacggtggagtttcttcc 590
Query: 181 gagcctgaacatgatattgatatgttatatmctggcacaaatmactggtacaattatggc 240
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 589 gagcctgaacatgatattgatatgttatatcctggcacaaatcactggtacaattatggc 530
Query: 241 tggaaaawagtggttgaacatgctgttaaaammagaamtattgtmtatactatmtatata 300
||||||| ||||||||||||||||||||||| |||| |||||| |||||||| ||||||
Sbjct: 529 tggaaaatagtggttgaacatgctgttaaaaccagaactattgtctatactatctatata 470
Query: 301 awttaatagtcaaagaaagcttcaagtttgaaagatttttgacgtaatttgataagttga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 469 atttaatagtcaaagaaagcttcaagtttgaaagatttttgacgtaatttgatcagttga 410
Query: 361 gagataaaaramawgagaagagacgtcattagaaamcaaaatgatccatgggggacatag 420
||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 409 gagataaaagacatgagaagagacgtcattagaaaccaaaatgatccatgggggacatag 350
Query: 421 aaatggcactgattagtaaaatatagaaccagttaaaataactgaaagaactgatggaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaatggcactgattagtaaaatatagaaccagttaaaataactgaaagaactgatggaac 290
Query: 481 acttaccttaatctatggtaaattactatatctatgacagtgagataaaccttatgagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 acttaccttaatctatggtaaattactatatctatgacagtgagataaaccttatgagct 230
Query: 541 gcattaccccgggtaacctctgactcaatggcttcgaaattttgaaaaaaagtttcagtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gcattaccccgggtaacctctgactcaatggcttcgaaattttgaaaaaaagtttcagtc 170
Query: 601 gcatcgcgatctgcatatcagaggtttttgaacaccacatgagtagaacaatcgtgtatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gcatcgcgatctgcatatcagaggtttttgaacaccacatgagtagaacaatcgtgtatt 110
Query: 661 ttawkayygttataccttgagtwatagatctgtagttttagattacgataaagattttca 720
| | | |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 109 taaagaccgttataccttgagtaatagatctgtagttttagattacgataaagattttca 50
Query: 721 agagcaatctkkaaatctacttttcaacgctgcaagttggttatyagtta 770
|||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct: 49 agagcaatctggaaatctacttttcaacgctgcaagtt-gttatcagtta 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5326
Number of Sequences: 1807
Number of extensions: 5326
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.6 bits)